Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL031731.1-201ENST00000642131 2094 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC28A1O00337 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 AC006504.4-201ENST00000592118 1568 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 MIR1224-201ENST00000408193 85 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC28A1O00337 LAGE3P1-201ENST00000425356 484 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC28A1O00337 SLC25A6P2-201ENST00000497974 877 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 PRELID1P1-202ENST00000567272 903 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC28A1O00337 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
SLC28A1O00337 GGTLC5P-201ENST00000617623 998 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC28A1O00337 AP001350.2-201ENST00000625104 1094 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A1O00337 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A1O00337 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC28A1O00337 LINC02199-201ENST00000506655 2702 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 AL353732.1-201ENST00000569618 1459 ntBASIC16.1■□□□□ 0.17
SLC28A1O00337 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 GGT4P-201ENST00000623672 1708 ntBASIC16.09■□□□□ 0.17
SLC28A1O00337 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 ELK2BP-201ENST00000415014 1224 ntBASIC16.09■□□□□ 0.17
SLC28A1O00337 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 SAPCD2P3-201ENST00000455031 850 ntBASIC16.09■□□□□ 0.17
SLC28A1O00337 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 AC021087.4-201ENST00000563761 564 ntBASIC16.09■□□□□ 0.17
SLC28A1O00337 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC28A1O00337 AC025062.2-201ENST00000605477 670 ntBASIC16.09■□□□□ 0.17
SLC28A1O00337 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A1O00337 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A1O00337 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A1O00337 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A1O00337 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SLC28A1O00337 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A1O00337 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SLC28A1O00337 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A1O00337 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A1O00337 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
SLC28A1O00337 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC28A1O00337 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A1O00337 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
SLC28A1O00337 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC28A1O00337 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms