Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC10.2□□□□□ -0.78
MACF1Q9UPN3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
MACF1Q9UPN3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 AC120024.1-201ENST00000562672 995 ntBASIC10.19□□□□□ -0.78
MACF1Q9UPN3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 AL031602.1-201ENST00000633169 911 ntBASIC10.19□□□□□ -0.78
MACF1Q9UPN3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 CD99P1-205ENST00000527459 561 ntBASIC10.19□□□□□ -0.78
MACF1Q9UPN3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 AL499627.2-201ENST00000606283 725 ntBASIC10.19□□□□□ -0.78
MACF1Q9UPN3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
MACF1Q9UPN3 KRT18P24-201ENST00000344739 1156 ntBASIC10.18□□□□□ -0.78
MACF1Q9UPN3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 GRAMD4P4-201ENST00000613563 1115 ntBASIC10.18□□□□□ -0.78
MACF1Q9UPN3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC10.18□□□□□ -0.78
MACF1Q9UPN3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
MACF1Q9UPN3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 AC010864.1-201ENST00000609407 1511 ntBASIC10.17□□□□□ -0.78
MACF1Q9UPN3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC10.17□□□□□ -0.78
MACF1Q9UPN3 AC104771.1-201ENST00000603335 964 ntBASIC10.17□□□□□ -0.78
MACF1Q9UPN3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 YBX1P1-201ENST00000445822 960 ntBASIC10.16□□□□□ -0.78
MACF1Q9UPN3 AK3-203ENST00000447596 705 ntTSL 2 BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
MACF1Q9UPN3 AL161658.1-201ENST00000623641 1967 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 TSPY20P-201ENST00000450910 630 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L2-201ENST00000561772 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L6-201ENST00000626483 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L1-201ENST00000627662 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L8-201ENST00000629013 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L3-201ENST00000630187 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L7-201ENST00000630678 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 DUX4L5-201ENST00000630834 1275 ntBASIC10.15□□□□□ -0.78
MACF1Q9UPN3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
MACF1Q9UPN3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
MACF1Q9UPN3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
MACF1Q9UPN3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC10.15□□□□□ -0.79
MACF1Q9UPN3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
MACF1Q9UPN3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 AC008687.6-201ENST00000596318 630 ntBASIC10.14□□□□□ -0.79
MACF1Q9UPN3 MAG-206ENST00000597035 542 ntTSL 4 BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms