Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
APH1AQ96BI3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APH1AQ96BI3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
APH1AQ96BI3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APH1AQ96BI3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.17■□□□□ 0.98
APH1AQ96BI3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.17■□□□□ 0.98
APH1AQ96BI3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.16■□□□□ 0.98
APH1AQ96BI3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
APH1AQ96BI3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
APH1AQ96BI3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.16■□□□□ 0.98
APH1AQ96BI3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APH1AQ96BI3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
APH1AQ96BI3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.15■□□□□ 0.98
APH1AQ96BI3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.15■□□□□ 0.98
APH1AQ96BI3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APH1AQ96BI3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
APH1AQ96BI3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.15■□□□□ 0.98
APH1AQ96BI3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APH1AQ96BI3 AC091060.1-201ENST00000623524 1766 ntBASIC21.15■□□□□ 0.98
APH1AQ96BI3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.15■□□□□ 0.98
APH1AQ96BI3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
APH1AQ96BI3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
APH1AQ96BI3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
APH1AQ96BI3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
APH1AQ96BI3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APH1AQ96BI3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APH1AQ96BI3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APH1AQ96BI3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APH1AQ96BI3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
APH1AQ96BI3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
APH1AQ96BI3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.12■□□□□ 0.97
APH1AQ96BI3 AC145676.1-201ENST00000514988 2004 ntBASIC21.12■□□□□ 0.97
APH1AQ96BI3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
APH1AQ96BI3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
APH1AQ96BI3 AC096887.2-201ENST00000623443 1957 ntBASIC21.12■□□□□ 0.97
APH1AQ96BI3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
APH1AQ96BI3 AC010980.1-201ENST00000587192 1142 ntBASIC21.12■□□□□ 0.97
APH1AQ96BI3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.12■□□□□ 0.97
APH1AQ96BI3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.11■□□□□ 0.97
APH1AQ96BI3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APH1AQ96BI3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.11■□□□□ 0.97
APH1AQ96BI3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
APH1AQ96BI3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
APH1AQ96BI3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.11■□□□□ 0.97
APH1AQ96BI3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APH1AQ96BI3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.11■□□□□ 0.97
APH1AQ96BI3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.11■□□□□ 0.97
APH1AQ96BI3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APH1AQ96BI3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
APH1AQ96BI3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APH1AQ96BI3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
APH1AQ96BI3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.1■□□□□ 0.97
APH1AQ96BI3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.1■□□□□ 0.97
APH1AQ96BI3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APH1AQ96BI3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
APH1AQ96BI3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APH1AQ96BI3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APH1AQ96BI3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
APH1AQ96BI3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.09■□□□□ 0.97
APH1AQ96BI3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APH1AQ96BI3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
APH1AQ96BI3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
APH1AQ96BI3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
APH1AQ96BI3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
APH1AQ96BI3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
APH1AQ96BI3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.08■□□□□ 0.97
APH1AQ96BI3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
APH1AQ96BI3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.08■□□□□ 0.97
APH1AQ96BI3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
APH1AQ96BI3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
APH1AQ96BI3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
APH1AQ96BI3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
APH1AQ96BI3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APH1AQ96BI3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APH1AQ96BI3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
APH1AQ96BI3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APH1AQ96BI3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
APH1AQ96BI3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.07■□□□□ 0.96
APH1AQ96BI3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.07■□□□□ 0.96
APH1AQ96BI3 LONRF2P2-201ENST00000439212 571 ntBASIC21.07■□□□□ 0.96
APH1AQ96BI3 AC019171.1-201ENST00000601251 1056 ntBASIC21.07■□□□□ 0.96
APH1AQ96BI3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.07■□□□□ 0.96
APH1AQ96BI3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APH1AQ96BI3 AC097639.1-201ENST00000565519 1891 ntBASIC21.07■□□□□ 0.96
APH1AQ96BI3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APH1AQ96BI3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
APH1AQ96BI3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
APH1AQ96BI3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
APH1AQ96BI3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
APH1AQ96BI3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
APH1AQ96BI3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
APH1AQ96BI3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
APH1AQ96BI3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms