Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCHD4Q6ZW05 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PTCHD4Q6ZW05 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PTCHD4Q6ZW05 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.83■■□□□ 1.08
PTCHD4Q6ZW05 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 AL359258.2-201ENST00000564063 1566 ntBASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.82■■□□□ 1.08
PTCHD4Q6ZW05 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
PTCHD4Q6ZW05 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.8■■□□□ 1.08
PTCHD4Q6ZW05 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCHD4Q6ZW05 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCHD4Q6ZW05 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCHD4Q6ZW05 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCHD4Q6ZW05 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTCHD4Q6ZW05 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.79■■□□□ 1.08
PTCHD4Q6ZW05 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 LINC01124-201ENST00000409786 2117 ntBASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCHD4Q6ZW05 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 MIR3648-2-201ENST00000581792 180 ntBASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 MIR3648-1-201ENST00000615959 180 ntBASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCHD4Q6ZW05 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTCHD4Q6ZW05 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 AL359504.2-201ENST00000605506 1601 ntBASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCHD4Q6ZW05 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 AP003733.4-201ENST00000623785 1697 ntBASIC21.75■■□□□ 1.07
PTCHD4Q6ZW05 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCHD4Q6ZW05 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCHD4Q6ZW05 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCHD4Q6ZW05 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PTCHD4Q6ZW05 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PTCHD4Q6ZW05 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.72■■□□□ 1.07
PTCHD4Q6ZW05 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCHD4Q6ZW05 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.72■■□□□ 1.07
PTCHD4Q6ZW05 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCHD4Q6ZW05 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.71■■□□□ 1.07
PTCHD4Q6ZW05 AC016575.1-201ENST00000607026 382 ntBASIC21.71■■□□□ 1.07
PTCHD4Q6ZW05 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCHD4Q6ZW05 AC133561.1-201ENST00000568600 2415 ntBASIC21.71■■□□□ 1.07
PTCHD4Q6ZW05 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
PTCHD4Q6ZW05 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms