Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YAR064WYAR064W 300 nt6.53□□□□□ -1.36
MSH1P25846 RUF23RUF23 254 nt6.53□□□□□ -1.36
MSH1P25846 SCS22YBL091C-A 528 nt6.53□□□□□ -1.36
MSH1P25846 LSC1YOR142W 990 nt6.53□□□□□ -1.36
MSH1P25846 ILV6YCL009C 930 nt6.53□□□□□ -1.36
MSH1P25846 GPA2YER020W 1350 nt6.53□□□□□ -1.36
MSH1P25846 TNA1YGR260W 1605 nt6.53□□□□□ -1.36
MSH1P25846 AIM17YHL021C 1398 nt6.53□□□□□ -1.36
MSH1P25846 BSC5YNR069C 1470 nt6.53□□□□□ -1.36
MSH1P25846 GAT1YFL021W 1533 nt6.52□□□□□ -1.37
MSH1P25846 YHK8YHR048W 1545 nt6.52□□□□□ -1.37
MSH1P25846 YKL153WYKL153W 510 nt6.52□□□□□ -1.37
MSH1P25846 SRN2YLR119W 642 nt6.52□□□□□ -1.37
MSH1P25846 YMC1YPR058W 924 nt6.52□□□□□ -1.37
MSH1P25846 NMT1YLR195C 1368 nt6.52□□□□□ -1.37
MSH1P25846 GUA1YMR217W 1578 nt6.52□□□□□ -1.37
MSH1P25846 GUS1YGL245W 2127 nt6.51□□□□□ -1.37
MSH1P25846 OM45YIL136W 1182 nt6.51□□□□□ -1.37
MSH1P25846 YKL223WYKL223W 333 nt6.51□□□□□ -1.37
MSH1P25846 ELC1YPL046C 300 nt6.51□□□□□ -1.37
MSH1P25846 YPR150WYPR150W 522 nt6.51□□□□□ -1.37
MSH1P25846 ECM31YBR176W 939 nt6.51□□□□□ -1.37
MSH1P25846 SKN1YGR143W 2316 nt6.51□□□□□ -1.37
MSH1P25846 SAC6YDR129C 1929 nt6.5□□□□□ -1.37
MSH1P25846 BNA5YLR231C 1362 nt6.5□□□□□ -1.37
MSH1P25846 RPT3YDR394W 1287 nt6.5□□□□□ -1.37
MSH1P25846 RPL10YLR075W 666 nt6.5□□□□□ -1.37
MSH1P25846 ODC2YOR222W 924 nt6.5□□□□□ -1.37
MSH1P25846 YIL092WYIL092W 1902 nt6.5□□□□□ -1.37
MSH1P25846 RCK1YGL158W 1539 nt6.5□□□□□ -1.37
MSH1P25846 EXG1YLR300W 1347 nt6.5□□□□□ -1.37
MSH1P25846 RIX7YLL034C 2514 nt6.49□□□□□ -1.37
MSH1P25846 AMD2YDR242W 1650 nt6.49□□□□□ -1.37
MSH1P25846 GAL83YER027C 1254 nt6.49□□□□□ -1.37
MSH1P25846 NCS6YGL211W 1080 nt6.49□□□□□ -1.37
MSH1P25846 YIL077CYIL077C 963 nt6.49□□□□□ -1.37
MSH1P25846 MRPL24YMR193W 777 nt6.49□□□□□ -1.37
MSH1P25846 RPO26YPR187W 468 nt6.49□□□□□ -1.37
MSH1P25846 EPS1YIL005W 2106 nt6.49□□□□□ -1.37
MSH1P25846 PYC2YBR218C 3543 nt6.49□□□□□ -1.37
MSH1P25846 HIR1YBL008W 2523 nt6.48□□□□□ -1.37
MSH1P25846 GUD1YDL238C 1470 nt6.48□□□□□ -1.37
MSH1P25846 VMA3YEL027W 483 nt6.48□□□□□ -1.37
MSH1P25846 YLR184WYLR184W 348 nt6.48□□□□□ -1.37
MSH1P25846 COA2YPL189C-A 207 nt6.48□□□□□ -1.37
MSH1P25846 HAL1YPR005C 885 nt6.48□□□□□ -1.37
MSH1P25846 IRS4YKR019C 1848 nt6.48□□□□□ -1.37
MSH1P25846 GSY2YLR258W 2118 nt6.47□□□□□ -1.37
MSH1P25846 ATG7YHR171W 1893 nt6.47□□□□□ -1.37
MSH1P25846 YMR279CYMR279C 1623 nt6.47□□□□□ -1.37
MSH1P25846 MRS3YJL133W 945 nt6.47□□□□□ -1.37
MSH1P25846 RSA3YLR221C 663 nt6.47□□□□□ -1.37
MSH1P25846 NOP7YGR103W 1818 nt6.47□□□□□ -1.37
MSH1P25846 YCK1YHR135C 1617 nt6.47□□□□□ -1.37
MSH1P25846 ERG8YMR220W 1356 nt6.46□□□□□ -1.37
MSH1P25846 HXT17YNR072W 1695 nt6.46□□□□□ -1.37
MSH1P25846 ADK2YER170W 678 nt6.46□□□□□ -1.38
MSH1P25846 TFG2YGR005C 1203 nt6.46□□□□□ -1.38
MSH1P25846 YNL228WYNL228W 777 nt6.46□□□□□ -1.38
MSH1P25846 PRE2YPR103W 864 nt6.46□□□□□ -1.38
MSH1P25846 GLE1YDL207W 1617 nt6.46□□□□□ -1.38
MSH1P25846 RPN5YDL147W 1338 nt6.46□□□□□ -1.38
MSH1P25846 PPT1YGR123C 1542 nt6.45□□□□□ -1.38
MSH1P25846 CLB4YLR210W 1383 nt6.45□□□□□ -1.38
MSH1P25846 YPL071CYPL071C 471 nt6.45□□□□□ -1.38
MSH1P25846 IFA38YBR159W 1044 nt6.45□□□□□ -1.38
MSH1P25846 EMW1YNL313C 2715 nt6.45□□□□□ -1.38
MSH1P25846 CHO1YER026C 831 nt6.44□□□□□ -1.38
MSH1P25846 RPN11YFR004W 921 nt6.44□□□□□ -1.38
MSH1P25846 SRL2YLR082C 1179 nt6.44□□□□□ -1.38
MSH1P25846 TAL1YLR354C 1008 nt6.44□□□□□ -1.38
MSH1P25846 GTO3YMR251W 1101 nt6.44□□□□□ -1.38
MSH1P25846 RDL1YOR285W 420 nt6.44□□□□□ -1.38
MSH1P25846 PTC4YBR125C 1182 nt6.44□□□□□ -1.38
MSH1P25846 HSP104YLL026W 2727 nt6.44□□□□□ -1.38
MSH1P25846 DBP9YLR276C 1785 nt6.44□□□□□ -1.38
MSH1P25846 YLL067CYLL067C 3618 nt6.43□□□□□ -1.38
MSH1P25846 RIM101YHL027W 1878 nt6.43□□□□□ -1.38
MSH1P25846 MDH1YKL085W 1005 nt6.43□□□□□ -1.38
MSH1P25846 SCS7YMR272C 1155 nt6.43□□□□□ -1.38
MSH1P25846 YOL131WYOL131W 327 nt6.43□□□□□ -1.38
MSH1P25846 MSS1YMR023C 1581 nt6.43□□□□□ -1.38
MSH1P25846 XBP1YIL101C 1944 nt6.42□□□□□ -1.38
MSH1P25846 ILV1YER086W 1731 nt6.42□□□□□ -1.38
MSH1P25846 CCT8YJL008C 1707 nt6.42□□□□□ -1.38
MSH1P25846 BUG1YDL099W 1026 nt6.42□□□□□ -1.38
MSH1P25846 RHO4YKR055W 876 nt6.42□□□□□ -1.38
MSH1P25846 MHT1YLL062C 975 nt6.42□□□□□ -1.38
MSH1P25846 CTF19YPL018W 1110 nt6.42□□□□□ -1.38
MSH1P25846 YEA6YEL006W 1008 nt6.41□□□□□ -1.38
MSH1P25846 YGR291CYGR291C 222 nt6.41□□□□□ -1.38
MSH1P25846 YBR298C-AYBR298C-A 222 nt6.41□□□□□ -1.38
MSH1P25846 KKQ8YKL168C 2175 nt6.41□□□□□ -1.38
MSH1P25846 MCM3YEL032W 2916 nt6.4□□□□□ -1.38
MSH1P25846 DIT1YDR403W 1611 nt6.4□□□□□ -1.38
MSH1P25846 CWC21YDR482C 408 nt6.4□□□□□ -1.38
MSH1P25846 DRE2YKR071C 1047 nt6.4□□□□□ -1.38
MSH1P25846 PTR2YKR093W 1806 nt6.4□□□□□ -1.38
MSH1P25846 YEL020CYEL020C 1683 nt6.39□□□□□ -1.39
MSH1P25846 TBF1YPL128C 1689 nt6.39□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms