Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm10477F6SW83 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Gm10477F6SW83 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm10477F6SW83 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm10477F6SW83 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm10477F6SW83 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm10477F6SW83 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.08■□□□□ 0.81
Gm10477F6SW83 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm10477F6SW83 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm10477F6SW83 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm10477F6SW83 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm10477F6SW83 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.07■□□□□ 0.8
Gm10477F6SW83 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Gm24804-201ENSMUST00000174982 85 ntBASIC20.06■□□□□ 0.8
Gm10477F6SW83 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm10477F6SW83 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm10477F6SW83 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gm10477F6SW83 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.05■□□□□ 0.8
Gm10477F6SW83 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm10477F6SW83 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm10477F6SW83 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Gm10477F6SW83 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gm10477F6SW83 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm10477F6SW83 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Gm10477F6SW83 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.03■□□□□ 0.8
Gm10477F6SW83 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10477F6SW83 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10477F6SW83 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10477F6SW83 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm10477F6SW83 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10477F6SW83 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm10477F6SW83 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm10477F6SW83 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm10477F6SW83 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm10477F6SW83 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gm10477F6SW83 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm10477F6SW83 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Gm10477F6SW83 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm10477F6SW83 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Gm10477F6SW83 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm10477F6SW83 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm10477F6SW83 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Gm10477F6SW83 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm10477F6SW83 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20■□□□□ 0.79
Gm10477F6SW83 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.99■□□□□ 0.79
Gm10477F6SW83 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Gm10477F6SW83 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10477F6SW83 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10477F6SW83 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10477F6SW83 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10477F6SW83 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10477F6SW83 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10477F6SW83 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10477F6SW83 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10477F6SW83 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10477F6SW83 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10477F6SW83 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10477F6SW83 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm10477F6SW83 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm10477F6SW83 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm10477F6SW83 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm10477F6SW83 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10477F6SW83 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm10477F6SW83 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Gm10477F6SW83 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.94■□□□□ 0.78
Gm10477F6SW83 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm10477F6SW83 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Gm10477F6SW83 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm10477F6SW83 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm10477F6SW83 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10477F6SW83 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10477F6SW83 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10477F6SW83 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10477F6SW83 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms