Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 TIMM8BP1-201ENST00000452384 211 ntBASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 AL390955.2-201ENST00000603032 514 ntBASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDZRN3Q9UPQ7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDZRN3Q9UPQ7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.52■■□□□ 1.03
PDZRN3Q9UPQ7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
PDZRN3Q9UPQ7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AL355306.1-201ENST00000415580 579 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AL671277.1-201ENST00000429656 993 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 INGX-202ENST00000489074 768 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AF228730.6-201ENST00000641497 218 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AC084121.3-201ENST00000641716 218 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AC105233.6-201ENST00000642093 218 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 OR6D1P-202ENST00000641007 5290 ntBASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDZRN3Q9UPQ7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 BASP1P1-201ENST00000430708 665 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 RN7SL589P-201ENST00000481268 310 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 AC069335.1-201ENST00000489972 472 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 AL645728.2-201ENST00000641974 660 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 AC092919.2-201ENST00000623631 1645 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 AC018695.7-201ENST00000624587 2492 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 FRMD8P1-201ENST00000440433 1524 ntBASIC21.5■■□□□ 1.03
PDZRN3Q9UPQ7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 AC140658.5-201ENST00000438532 169 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 SPDYE11-202ENST00000450699 704 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 AC093214.1-201ENST00000511688 1107 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 AC051619.7-201ENST00000568314 623 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 SPDYE9P-201ENST00000570642 692 ntBASIC21.49■■□□□ 1.03
PDZRN3Q9UPQ7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms