Protein–RNA interactions for Protein: Q9UN75

PCDHA12, Protocadherin alpha-12, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12Q9UN75 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA12Q9UN75 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 PCDHA14-201ENST00000506751 2298 ntBASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 BX842568.4-201ENST00000421222 227 ntBASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PCDHA12Q9UN75 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 FAM58CP-201ENST00000435741 640 ntBASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AL161645.1-201ENST00000622716 1255 ntBASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA12Q9UN75 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA12Q9UN75 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHA12Q9UN75 GGT4P-201ENST00000623672 1708 ntBASIC18.77■□□□□ 0.59
PCDHA12Q9UN75 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PCDHA12Q9UN75 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA12Q9UN75 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDHA12Q9UN75 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 MKNK2P1-201ENST00000437526 628 ntBASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 AC092865.5-201ENST00000545435 363 ntBASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 AC005829.1-201ENST00000570002 483 ntBASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA12Q9UN75 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms