Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 AP000867.4-201ENST00000641616 219 ntBASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 AP005117.1-201ENST00000584346 1413 ntBASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 PMPCAP1-201ENST00000508114 1576 ntBASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 AP001269.4-201ENST00000609611 512 ntBASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 AL162727.3-201ENST00000635661 2787 ntBASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 AC008741.2-201ENST00000612792 3115 ntBASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LIN7CQ9NUP9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 AL139384.1-201ENST00000612143 3047 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 TPM4P1-201ENST00000436100 807 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SIGLEC30P-201ENST00000455569 941 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SCARNA2-201ENST00000458748 420 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 RN7SL510P-201ENST00000581311 263 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms