Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 REXO1L6P-202ENST00000619970 1078 ntBASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 REXO1L3P-201ENST00000622202 1288 ntBASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 MTHFR-217ENST00000641820 1569 ntBASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 ELK2BP-201ENST00000415014 1224 ntBASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 AC091167.2-201ENST00000579581 588 ntBASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 AL512652.2-201ENST00000625156 1716 ntBASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 KRT8P39-201ENST00000396270 1433 ntBASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRTM1Q9HBL6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AC006504.4-201ENST00000592118 1568 ntBASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 LINC01711-201ENST00000598340 967 ntBASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AC025062.2-201ENST00000605477 670 ntBASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 AL805961.1-202ENST00000641562 540 ntBASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.09■□□□□ 0.17
LRTM1Q9HBL6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms