Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC099398.1-201ENST00000567919 2776 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MIR943-201ENST00000401286 94 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CDK2AP2P3-201ENST00000422476 372 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MTRF1LP2-201ENST00000506027 1122 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC087641.1-201ENST00000557561 1021 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 DUT-210ENST00000559935 569 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SPCS2P1-201ENST00000561636 679 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 BNIP3P41-202ENST00000616656 861 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MIR6080-201ENST00000617359 66 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AL390754.1-201ENST00000619088 582 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms