Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 SRD5A3P1-201ENST00000603021 949 ntBASIC20.08■□□□□ 0.81
RTFDC1Q9BY42 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RTFDC1Q9BY42 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AC112492.5-201ENST00000421897 457 ntBASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AC093724.1-201ENST00000448659 1027 ntBASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 SERBP1P3-201ENST00000459980 809 ntBASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AC061975.2-201ENST00000581722 295 ntBASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AC099568.2-201ENST00000609194 695 ntBASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AL033527.5-202ENST00000641632 1098 ntBASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
RTFDC1Q9BY42 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 AC055876.2-201ENST00000531834 546 ntBASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 KRT17P8-201ENST00000540749 863 ntBASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 AC007431.3-201ENST00000623221 587 ntBASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTFDC1Q9BY42 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 MIR6805-201ENST00000615055 62 ntBASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTFDC1Q9BY42 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms