Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AC012640.2-201ENST00000561606 901 ntBASIC15.88■□□□□ 0.13
BBS4Q96RK4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 AL773604.1-201ENST00000617417 272 ntBASIC15.88■□□□□ 0.13
BBS4Q96RK4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BBS4Q96RK4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
BBS4Q96RK4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 HLA-J-202ENST00000469281 1241 ntBASIC15.87■□□□□ 0.13
BBS4Q96RK4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AC091167.2-201ENST00000579581 588 ntBASIC15.87■□□□□ 0.13
BBS4Q96RK4 MPDU1-223ENST00000582151 728 ntBASIC15.87■□□□□ 0.13
BBS4Q96RK4 REXO1L3P-201ENST00000622202 1288 ntBASIC15.87■□□□□ 0.13
BBS4Q96RK4 FAM215A-202ENST00000632077 792 ntBASIC15.87■□□□□ 0.13
BBS4Q96RK4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AC006538.1-201ENST00000567905 1585 ntBASIC15.87■□□□□ 0.13
BBS4Q96RK4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BBS4Q96RK4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BBS4Q96RK4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BBS4Q96RK4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BBS4Q96RK4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BBS4Q96RK4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BBS4Q96RK4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BBS4Q96RK4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BBS4Q96RK4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 AC092910.1-201ENST00000482027 1129 ntBASIC15.86■□□□□ 0.13
BBS4Q96RK4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.86■□□□□ 0.13
BBS4Q96RK4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms