Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC008738.7-201ENST00000609744 511 ntBASIC16.92■□□□□ 0.3
CHFRQ96EP1 AC009118.2-201ENST00000613275 655 ntBASIC16.92■□□□□ 0.3
CHFRQ96EP1 TEX28P1-201ENST00000613479 1221 ntBASIC16.92■□□□□ 0.3
CHFRQ96EP1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHFRQ96EP1 TEX28P2-201ENST00000617764 1221 ntBASIC16.92■□□□□ 0.3
CHFRQ96EP1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.92■□□□□ 0.3
CHFRQ96EP1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.92■□□□□ 0.3
CHFRQ96EP1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHFRQ96EP1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.92■□□□□ 0.3
CHFRQ96EP1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHFRQ96EP1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHFRQ96EP1 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.92■□□□□ 0.3
CHFRQ96EP1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.92■□□□□ 0.3
CHFRQ96EP1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHFRQ96EP1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.91■□□□□ 0.3
CHFRQ96EP1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 AC092068.3-201ENST00000587894 2016 ntBASIC16.91■□□□□ 0.3
CHFRQ96EP1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 PIN1P1-201ENST00000412108 996 ntBASIC16.91■□□□□ 0.3
CHFRQ96EP1 RPL37AP1-201ENST00000412502 279 ntBASIC16.91■□□□□ 0.3
CHFRQ96EP1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 AL596325.1-201ENST00000563991 1082 ntBASIC16.91■□□□□ 0.3
CHFRQ96EP1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 AC013467.2-201ENST00000605472 835 ntBASIC16.91■□□□□ 0.3
CHFRQ96EP1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.91■□□□□ 0.3
CHFRQ96EP1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHFRQ96EP1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 COX5BP8-201ENST00000416911 349 ntBASIC16.9■□□□□ 0.3
CHFRQ96EP1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 AL133215.2-201ENST00000609242 977 ntBASIC16.9■□□□□ 0.3
CHFRQ96EP1 SPTSSB-204ENST00000617024 1292 ntBASIC16.9■□□□□ 0.3
CHFRQ96EP1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.9■□□□□ 0.3
CHFRQ96EP1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHFRQ96EP1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHFRQ96EP1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHFRQ96EP1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHFRQ96EP1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.89■□□□□ 0.29
CHFRQ96EP1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHFRQ96EP1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHFRQ96EP1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.89■□□□□ 0.29
CHFRQ96EP1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHFRQ96EP1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.89■□□□□ 0.29
CHFRQ96EP1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHFRQ96EP1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHFRQ96EP1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms