Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM9SF4Q92544 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.82■□□□□ 0.12
TM9SF4Q92544 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 AC004449.1-201ENST00000564240 433 ntBASIC15.81■□□□□ 0.12
TM9SF4Q92544 AL590787.1-201ENST00000568856 1315 ntBASIC15.81■□□□□ 0.12
TM9SF4Q92544 MIR3197-201ENST00000582241 73 ntBASIC15.81■□□□□ 0.12
TM9SF4Q92544 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 LINC02084-201ENST00000606069 1096 ntBASIC15.81■□□□□ 0.12
TM9SF4Q92544 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 AC046185.3-201ENST00000623228 1824 ntBASIC15.81■□□□□ 0.12
TM9SF4Q92544 AC011270.2-201ENST00000624293 2550 ntBASIC15.81■□□□□ 0.12
TM9SF4Q92544 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM9SF4Q92544 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM9SF4Q92544 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 AC129492.6-201ENST00000611383 1305 ntBASIC15.8■□□□□ 0.12
TM9SF4Q92544 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 FAM185BP-201ENST00000443595 716 ntBASIC15.8■□□□□ 0.12
TM9SF4Q92544 AL513480.1-201ENST00000451731 511 ntBASIC15.8■□□□□ 0.12
TM9SF4Q92544 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 AC106028.4-201ENST00000614509 607 ntBASIC15.8■□□□□ 0.12
TM9SF4Q92544 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF4Q92544 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF4Q92544 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms