Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 HLA-A-202ENST00000376806 1854 ntBASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 PMS2P7-201ENST00000506558 1336 ntBASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AC002347.1-201ENST00000569543 541 ntBASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AC068137.2-201ENST00000605408 478 ntBASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AL513190.1-201ENST00000621254 727 ntBASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 AGGF1P2-201ENST00000426656 2106 ntBASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC148Q8NFR7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 AL118508.1-201ENST00000613502 2345 ntBASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 AC074386.1-202ENST00000463561 864 ntBASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 AL671710.1-201ENST00000610245 2349 ntBASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC148Q8NFR7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 AC092865.6-201ENST00000642101 219 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms