Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 AC060834.1-201ENST00000443027 2032 ntBASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 RPS8P6-201ENST00000426177 609 ntBASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 HTR5BP-201ENST00000430851 1154 ntBASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 FAM58CP-201ENST00000435741 640 ntBASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 AC068137.2-201ENST00000605408 478 ntBASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 SLC22A20-204ENST00000530038 1673 ntBASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD3Q6PCD5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AC124947.2-201ENST00000547118 1133 ntBASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AC005412.3-201ENST00000580309 715 ntBASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 MIR4469-201ENST00000583919 79 ntBASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 MIR4515-201ENST00000584082 81 ntBASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AC091812.2-201ENST00000619081 385 ntBASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 AC134684.3-201ENST00000641758 218 ntBASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFWD3Q6PCD5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 AL021920.2-201ENST00000624828 1351 ntBASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 KRT8P49-201ENST00000604166 1432 ntBASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 AP002472.1-201ENST00000577490 586 ntBASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 AL353732.1-201ENST00000569618 1459 ntBASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RFWD3Q6PCD5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms