Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 AC092337.1-201ENST00000568699 1129 ntBASIC21.23■□□□□ 0.99
NUP188Q5SRE5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUP188Q5SRE5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 KLF2P4-201ENST00000451959 1225 ntBASIC21.22■□□□□ 0.99
NUP188Q5SRE5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.22■□□□□ 0.99
NUP188Q5SRE5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 SERBP1P3-201ENST00000459980 809 ntBASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC009542.2-202ENST00000619004 1067 ntBASIC21.21■□□□□ 0.99
NUP188Q5SRE5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC073439.1-201ENST00000624121 1774 ntBASIC21.21■□□□□ 0.99
NUP188Q5SRE5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC007551.1-201ENST00000457394 519 ntBASIC21.21■□□□□ 0.99
NUP188Q5SRE5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.21■□□□□ 0.99
NUP188Q5SRE5 KRT8P12-202ENST00000472924 1397 ntBASIC21.21■□□□□ 0.99
NUP188Q5SRE5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NUP188Q5SRE5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
NUP188Q5SRE5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.2■□□□□ 0.98
NUP188Q5SRE5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP188Q5SRE5 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.2■□□□□ 0.98
NUP188Q5SRE5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms