Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL591846.1-201ENST00000451736 433 ntBASIC22.06■■□□□ 1.12
COL16A1Q07092 BX284668.4-201ENST00000453917 508 ntBASIC22.06■■□□□ 1.12
COL16A1Q07092 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC22.06■■□□□ 1.12
COL16A1Q07092 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC22.06■■□□□ 1.12
COL16A1Q07092 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC22.06■■□□□ 1.12
COL16A1Q07092 RERG-205ENST00000537647 935 ntTSL 2 BASIC22.06■■□□□ 1.12
COL16A1Q07092 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC22.06■■□□□ 1.12
COL16A1Q07092 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC22.06■■□□□ 1.12
COL16A1Q07092 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL16A1Q07092 AP006547.1-201ENST00000563435 692 ntBASIC22.06■■□□□ 1.12
COL16A1Q07092 MIR3619-201ENST00000579667 83 ntBASIC22.06■■□□□ 1.12
COL16A1Q07092 CLUHP6-201ENST00000580789 941 ntBASIC22.06■■□□□ 1.12
COL16A1Q07092 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC22.06■■□□□ 1.12
COL16A1Q07092 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC22.06■■□□□ 1.12
COL16A1Q07092 AC138627.1-207ENST00000641560 1006 ntBASIC22.06■■□□□ 1.12
COL16A1Q07092 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
COL16A1Q07092 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC22.05■■□□□ 1.12
COL16A1Q07092 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
COL16A1Q07092 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.05■■□□□ 1.12
COL16A1Q07092 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
COL16A1Q07092 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 RPS3-201ENST00000278572 907 ntTSL 3 BASIC22.05■■□□□ 1.12
COL16A1Q07092 BAATP1-201ENST00000412284 1225 ntBASIC22.05■■□□□ 1.12
COL16A1Q07092 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
COL16A1Q07092 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC22.05■■□□□ 1.12
COL16A1Q07092 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC22.05■■□□□ 1.12
COL16A1Q07092 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC22.05■■□□□ 1.12
COL16A1Q07092 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC22.05■■□□□ 1.12
COL16A1Q07092 AC013467.2-201ENST00000605472 835 ntBASIC22.05■■□□□ 1.12
COL16A1Q07092 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC22.05■■□□□ 1.12
COL16A1Q07092 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL16A1Q07092 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.05■■□□□ 1.12
COL16A1Q07092 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL16A1Q07092 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL16A1Q07092 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COL16A1Q07092 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
COL16A1Q07092 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.04■■□□□ 1.12
COL16A1Q07092 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 CNN2P8-201ENST00000421872 913 ntBASIC22.04■■□□□ 1.12
COL16A1Q07092 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC22.04■■□□□ 1.12
COL16A1Q07092 AC004898.1-201ENST00000451057 766 ntBASIC22.04■■□□□ 1.12
COL16A1Q07092 FAM86LP-201ENST00000478302 853 ntBASIC22.04■■□□□ 1.12
COL16A1Q07092 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC22.04■■□□□ 1.12
COL16A1Q07092 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL16A1Q07092 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC22.04■■□□□ 1.12
COL16A1Q07092 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.04■■□□□ 1.12
COL16A1Q07092 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL16A1Q07092 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL16A1Q07092 CYP4F24P-201ENST00000586049 1580 ntBASIC22.03■■□□□ 1.12
COL16A1Q07092 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 LBH-202ENST00000401506 485 ntTSL 3 BASIC22.03■■□□□ 1.12
COL16A1Q07092 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC22.03■■□□□ 1.12
COL16A1Q07092 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC22.03■■□□□ 1.12
COL16A1Q07092 PFN2-215ENST00000497148 743 ntTSL 4 BASIC22.03■■□□□ 1.12
COL16A1Q07092 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC22.03■■□□□ 1.12
COL16A1Q07092 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC22.03■■□□□ 1.12
COL16A1Q07092 HNRNPUP1-201ENST00000554987 333 ntBASIC22.03■■□□□ 1.12
COL16A1Q07092 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
COL16A1Q07092 AC120045.2-201ENST00000567334 178 ntBASIC22.03■■□□□ 1.12
COL16A1Q07092 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC22.03■■□□□ 1.12
COL16A1Q07092 AC005252.2-201ENST00000624630 1141 ntBASIC22.03■■□□□ 1.12
COL16A1Q07092 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.03■■□□□ 1.12
COL16A1Q07092 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
COL16A1Q07092 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.03■■□□□ 1.12
COL16A1Q07092 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.03■■□□□ 1.12
COL16A1Q07092 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
COL16A1Q07092 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
COL16A1Q07092 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL16A1Q07092 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL16A1Q07092 RPL17P11-201ENST00000417593 544 ntBASIC22.02■■□□□ 1.12
COL16A1Q07092 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
COL16A1Q07092 PTPA-217ENST00000434095 870 ntTSL 2 BASIC22.02■■□□□ 1.12
COL16A1Q07092 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC22.02■■□□□ 1.12
COL16A1Q07092 IMP3P2-201ENST00000489760 475 ntBASIC22.02■■□□□ 1.12
COL16A1Q07092 RPL8-205ENST00000527914 551 ntTSL 3 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms