Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 AC068880.1-201ENST00000507289 2297 ntBASIC19.45■□□□□ 0.7
IRX3P78415 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.45■□□□□ 0.7
IRX3P78415 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
IRX3P78415 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.45■□□□□ 0.7
IRX3P78415 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.45■□□□□ 0.7
IRX3P78415 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 MIR346-201ENST00000362234 95 ntBASIC19.45■□□□□ 0.7
IRX3P78415 SLC25A6P5-201ENST00000435663 894 ntBASIC19.45■□□□□ 0.7
IRX3P78415 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.45■□□□□ 0.7
IRX3P78415 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
IRX3P78415 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
IRX3P78415 AC092850.2-201ENST00000623821 2697 ntBASIC19.45■□□□□ 0.7
IRX3P78415 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX3P78415 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
IRX3P78415 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.44■□□□□ 0.7
IRX3P78415 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.44■□□□□ 0.7
IRX3P78415 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
IRX3P78415 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.44■□□□□ 0.7
IRX3P78415 AC131009.4-201ENST00000624048 1740 ntBASIC19.44■□□□□ 0.7
IRX3P78415 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.44■□□□□ 0.7
IRX3P78415 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.44■□□□□ 0.7
IRX3P78415 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.44■□□□□ 0.7
IRX3P78415 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.44■□□□□ 0.7
IRX3P78415 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.44■□□□□ 0.7
IRX3P78415 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX3P78415 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
IRX3P78415 FER1L4-210ENST00000615531 5998 ntBASIC19.43■□□□□ 0.7
IRX3P78415 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
IRX3P78415 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.43■□□□□ 0.7
IRX3P78415 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.43■□□□□ 0.7
IRX3P78415 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.43■□□□□ 0.7
IRX3P78415 AC005225.4-201ENST00000557330 545 ntBASIC19.43■□□□□ 0.7
IRX3P78415 MIR4453-201ENST00000584019 89 ntBASIC19.43■□□□□ 0.7
IRX3P78415 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
IRX3P78415 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
IRX3P78415 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
IRX3P78415 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
IRX3P78415 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX3P78415 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 PCDHA12-202ENST00000613593 2588 ntBASIC19.42■□□□□ 0.7
IRX3P78415 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.42■□□□□ 0.7
IRX3P78415 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.42■□□□□ 0.7
IRX3P78415 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.42■□□□□ 0.7
IRX3P78415 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.42■□□□□ 0.7
IRX3P78415 MPDU1-223ENST00000582151 728 ntBASIC19.42■□□□□ 0.7
IRX3P78415 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.42■□□□□ 0.7
IRX3P78415 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
IRX3P78415 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms