Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 AC006277.1-201ENST00000624348 1610 ntBASIC19.66■□□□□ 0.74
CNTNAP1P78357 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP1P78357 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP1P78357 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 RN7SL828P-201ENST00000607615 303 ntBASIC19.66■□□□□ 0.74
CNTNAP1P78357 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP1P78357 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP1P78357 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CNTNAP1P78357 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 AC015936.2-201ENST00000593177 259 ntBASIC19.65■□□□□ 0.74
CNTNAP1P78357 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP1P78357 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP1P78357 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP1P78357 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP1P78357 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.64■□□□□ 0.74
CNTNAP1P78357 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 AC108725.1-201ENST00000495472 409 ntBASIC19.64■□□□□ 0.73
CNTNAP1P78357 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 TUBB8P12-201ENST00000308911 1335 ntBASIC19.64■□□□□ 0.73
CNTNAP1P78357 TUBB7P-202ENST00000428444 1305 ntBASIC19.64■□□□□ 0.73
CNTNAP1P78357 TUBB8P7-204ENST00000567960 1332 ntBASIC19.64■□□□□ 0.73
CNTNAP1P78357 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP1P78357 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP1P78357 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms