Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ACTBP60709 SPDYE13P-201ENST00000445314 798 ntBASIC14.43□□□□□ -0.1
ACTBP60709 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.43□□□□□ -0.1
ACTBP60709 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.43□□□□□ -0.1
ACTBP60709 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
ACTBP60709 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ACTBP60709 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ACTBP60709 AL596087.1-201ENST00000400979 1969 ntBASIC14.43□□□□□ -0.1
ACTBP60709 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.43□□□□□ -0.1
ACTBP60709 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ACTBP60709 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 AC023824.1-201ENST00000562945 2975 ntBASIC14.42□□□□□ -0.1
ACTBP60709 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 Z83836.1-201ENST00000624605 1642 ntBASIC14.42□□□□□ -0.1
ACTBP60709 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.42□□□□□ -0.1
ACTBP60709 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.42□□□□□ -0.1
ACTBP60709 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.42□□□□□ -0.1
ACTBP60709 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AL021920.2-201ENST00000624828 1351 ntBASIC14.42□□□□□ -0.1
ACTBP60709 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.42□□□□□ -0.1
ACTBP60709 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AL049757.1-201ENST00000616842 1596 ntBASIC14.42□□□□□ -0.1
ACTBP60709 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ACTBP60709 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ACTBP60709 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms