Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 HCG4-201ENST00000418983 998 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 AL031284.1-201ENST00000419297 478 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.51■□□□□ 0.23
CDKN2DP55273 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.51■□□□□ 0.23
CDKN2DP55273 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.51■□□□□ 0.23
CDKN2DP55273 RNA5SP419-201ENST00000515908 135 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 AL160237.2-201ENST00000556165 472 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 ACTL9-202ENST00000612068 1252 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.51■□□□□ 0.23
CDKN2DP55273 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 AL513523.2-202ENST00000427283 2040 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKN2DP55273 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKN2DP55273 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 GPAA1P2-202ENST00000606848 1787 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 MTHFR-217ENST00000641820 1569 ntBASIC16.51■□□□□ 0.23
CDKN2DP55273 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKN2DP55273 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 KRT126P-201ENST00000549467 1181 ntBASIC16.5■□□□□ 0.23
CDKN2DP55273 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKN2DP55273 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKN2DP55273 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKN2DP55273 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.49■□□□□ 0.23
CDKN2DP55273 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.49■□□□□ 0.23
CDKN2DP55273 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms