Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 AL662844.4-201ENST00000606367 2838 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 PTCHD3P3-201ENST00000403073 906 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CX3CR1P49238 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.73□□□□□ -0.05
CX3CR1P49238 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.73□□□□□ -0.05
CX3CR1P49238 PAWRP1-201ENST00000451083 565 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.73□□□□□ -0.05
CX3CR1P49238 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC013467.2-201ENST00000605472 835 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 AC025062.2-201ENST00000605477 670 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC063926.3-201ENST00000624734 5658 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC006449.5-201ENST00000610658 2098 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC026691.1-201ENST00000602502 2017 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 MST1L-201ENST00000442552 2185 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 PI4KAP1-204ENST00000612579 1703 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 AL596257.1-201ENST00000641463 2694 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CX3CR1P49238 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CX3CR1P49238 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 ELK2BP-201ENST00000415014 1224 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 LAGE3P1-201ENST00000425356 484 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.72□□□□□ -0.05
CX3CR1P49238 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 AC087163.2-201ENST00000457299 853 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.72□□□□□ -0.05
CX3CR1P49238 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 AC021087.4-201ENST00000563761 564 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CX3CR1P49238 CLEC4GP1-201ENST00000596555 870 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 IFNL4P1-201ENST00000607083 540 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CX3CR1P49238 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CX3CR1P49238 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 ALOX12P2-203ENST00000570921 1945 ntBASIC14.72□□□□□ -0.05
CX3CR1P49238 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CR1P49238 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms