Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CTGFP29279 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTGFP29279 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CTGFP29279 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.55■□□□□ 0.56
CTGFP29279 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTGFP29279 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.55■□□□□ 0.56
CTGFP29279 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.55■□□□□ 0.56
CTGFP29279 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CTGFP29279 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.55■□□□□ 0.56
CTGFP29279 AC026979.3-201ENST00000607315 403 ntBASIC18.55■□□□□ 0.56
CTGFP29279 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTGFP29279 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CTGFP29279 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.55■□□□□ 0.56
CTGFP29279 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTGFP29279 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CTGFP29279 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CTGFP29279 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 TUBB1P2-201ENST00000422712 1306 ntBASIC18.54■□□□□ 0.56
CTGFP29279 TUBB1P1-201ENST00000503144 1300 ntBASIC18.54■□□□□ 0.56
CTGFP29279 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CTGFP29279 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.54■□□□□ 0.56
CTGFP29279 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.54■□□□□ 0.56
CTGFP29279 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CTGFP29279 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.54■□□□□ 0.56
CTGFP29279 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 AL355994.2-201ENST00000447882 704 ntBASIC18.54■□□□□ 0.56
CTGFP29279 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.54■□□□□ 0.56
CTGFP29279 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.54■□□□□ 0.56
CTGFP29279 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.54■□□□□ 0.56
CTGFP29279 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.54■□□□□ 0.56
CTGFP29279 AL391069.4-201ENST00000609583 481 ntBASIC18.54■□□□□ 0.56
CTGFP29279 AC074044.1-201ENST00000609673 707 ntBASIC18.54■□□□□ 0.56
CTGFP29279 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.54■□□□□ 0.56
CTGFP29279 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.54■□□□□ 0.56
CTGFP29279 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 LINC02012-201ENST00000608206 1725 ntBASIC18.54■□□□□ 0.56
CTGFP29279 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.54■□□□□ 0.56
CTGFP29279 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.54■□□□□ 0.56
CTGFP29279 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTGFP29279 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CTGFP29279 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CTGFP29279 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTGFP29279 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.53■□□□□ 0.56
CTGFP29279 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CTGFP29279 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 KRT43P-201ENST00000434019 910 ntBASIC18.53■□□□□ 0.56
CTGFP29279 CSF2RBP1-201ENST00000447905 391 ntBASIC18.53■□□□□ 0.56
CTGFP29279 KLF2P4-201ENST00000451959 1225 ntBASIC18.53■□□□□ 0.56
CTGFP29279 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 AC099548.2-209ENST00000480264 625 ntBASIC18.53■□□□□ 0.56
CTGFP29279 ZNF767P-206ENST00000513792 565 ntBASIC18.53■□□□□ 0.56
CTGFP29279 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.53■□□□□ 0.56
CTGFP29279 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CTGFP29279 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.53■□□□□ 0.56
CTGFP29279 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.53■□□□□ 0.56
CTGFP29279 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.53■□□□□ 0.56
CTGFP29279 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CTGFP29279 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.53■□□□□ 0.56
CTGFP29279 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.53■□□□□ 0.56
CTGFP29279 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.53■□□□□ 0.56
CTGFP29279 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTGFP29279 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTGFP29279 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.52■□□□□ 0.56
CTGFP29279 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.52■□□□□ 0.56
CTGFP29279 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.52■□□□□ 0.56
CTGFP29279 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTGFP29279 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTGFP29279 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTGFP29279 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.52■□□□□ 0.56
CTGFP29279 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms