Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.27■□□□□ 0.2
CD27P26842 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.27■□□□□ 0.2
CD27P26842 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD27P26842 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
CD27P26842 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.27■□□□□ 0.19
CD27P26842 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CD27P26842 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.27■□□□□ 0.19
CD27P26842 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD27P26842 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
CD27P26842 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD27P26842 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.26■□□□□ 0.19
CD27P26842 AL080243.2-201ENST00000418783 582 ntBASIC16.26■□□□□ 0.19
CD27P26842 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 AC024267.1-201ENST00000582320 895 ntBASIC16.26■□□□□ 0.19
CD27P26842 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.26■□□□□ 0.19
CD27P26842 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.26■□□□□ 0.19
CD27P26842 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD27P26842 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD27P26842 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.25■□□□□ 0.19
CD27P26842 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.25■□□□□ 0.19
CD27P26842 AL391256.1-201ENST00000443260 1855 ntBASIC16.25■□□□□ 0.19
CD27P26842 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 BTBD7P1-201ENST00000447253 1453 ntBASIC16.25■□□□□ 0.19
CD27P26842 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CD27P26842 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 COX5BP8-201ENST00000416911 349 ntBASIC16.25■□□□□ 0.19
CD27P26842 AL353779.1-201ENST00000434793 351 ntBASIC16.25■□□□□ 0.19
CD27P26842 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.25■□□□□ 0.19
CD27P26842 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 ZNF890P-202ENST00000530367 1156 ntBASIC16.25■□□□□ 0.19
CD27P26842 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.25■□□□□ 0.19
CD27P26842 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.25■□□□□ 0.19
CD27P26842 AC020765.3-201ENST00000613051 740 ntBASIC16.25■□□□□ 0.19
CD27P26842 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.25■□□□□ 0.19
CD27P26842 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CD27P26842 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.25■□□□□ 0.19
CD27P26842 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.25■□□□□ 0.19
CD27P26842 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.25■□□□□ 0.19
CD27P26842 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CD27P26842 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.25■□□□□ 0.19
CD27P26842 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CD27P26842 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CD27P26842 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.25■□□□□ 0.19
CD27P26842 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD27P26842 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD27P26842 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.24■□□□□ 0.19
CD27P26842 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD27P26842 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD27P26842 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms