Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.38□□□□□ -0.27
NF1P21359 RN7SL618P-201ENST00000477850 296 ntBASIC13.38□□□□□ -0.27
NF1P21359 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
NF1P21359 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.38□□□□□ -0.27
NF1P21359 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.38□□□□□ -0.27
NF1P21359 MIR4750-201ENST00000584564 56 ntBASIC13.38□□□□□ -0.27
NF1P21359 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NF1P21359 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NF1P21359 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NF1P21359 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NF1P21359 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.38□□□□□ -0.27
NF1P21359 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NF1P21359 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NF1P21359 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.37□□□□□ -0.27
NF1P21359 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NF1P21359 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.37□□□□□ -0.27
NF1P21359 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.37□□□□□ -0.27
NF1P21359 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.37□□□□□ -0.27
NF1P21359 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.37□□□□□ -0.27
NF1P21359 AC005357.2-202ENST00000590507 1060 ntBASIC13.37□□□□□ -0.27
NF1P21359 AL022328.1-201ENST00000610050 478 ntBASIC13.37□□□□□ -0.27
NF1P21359 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.37□□□□□ -0.27
NF1P21359 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.37□□□□□ -0.27
NF1P21359 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 LINC00304-203ENST00000565008 1864 ntBASIC13.37□□□□□ -0.27
NF1P21359 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 SLC22A20-204ENST00000530038 1673 ntBASIC13.37□□□□□ -0.27
NF1P21359 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.37□□□□□ -0.27
NF1P21359 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NF1P21359 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.37□□□□□ -0.27
NF1P21359 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 RN7SL818P-201ENST00000485099 259 ntBASIC13.37□□□□□ -0.27
NF1P21359 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.37□□□□□ -0.27
NF1P21359 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
NF1P21359 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 RN7SL725P-201ENST00000606439 259 ntBASIC13.37□□□□□ -0.27
NF1P21359 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.37□□□□□ -0.27
NF1P21359 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NF1P21359 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NF1P21359 AL607033.1-201ENST00000623900 1599 ntBASIC13.36□□□□□ -0.27
NF1P21359 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NF1P21359 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NF1P21359 RNU1-129P-201ENST00000384064 167 ntBASIC13.36□□□□□ -0.27
NF1P21359 MIR1227-201ENST00000408484 88 ntBASIC13.36□□□□□ -0.27
NF1P21359 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.36□□□□□ -0.27
NF1P21359 U1.21-201ENST00000580816 167 ntBASIC13.36□□□□□ -0.27
NF1P21359 AC020914.3-201ENST00000594712 304 ntBASIC13.36□□□□□ -0.27
NF1P21359 AC073389.1-201ENST00000595595 795 ntBASIC13.36□□□□□ -0.27
NF1P21359 AL031055.1-201ENST00000606362 631 ntBASIC13.36□□□□□ -0.27
NF1P21359 AP003419.4-201ENST00000616071 517 ntBASIC13.36□□□□□ -0.27
NF1P21359 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.36□□□□□ -0.27
NF1P21359 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.36□□□□□ -0.27
NF1P21359 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NF1P21359 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NF1P21359 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 AL591846.1-201ENST00000451736 433 ntBASIC13.36□□□□□ -0.27
NF1P21359 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms