Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL513210.1-201ENST00000629608 234 ntBASIC17.63■□□□□ 0.41
RTN3O95197 AC105339.1-204ENST00000636249 355 ntBASIC17.63■□□□□ 0.41
RTN3O95197 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RTN3O95197 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RTN3O95197 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN3O95197 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 AL645608.8-201ENST00000606034 2086 ntBASIC17.62■□□□□ 0.41
RTN3O95197 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTN3O95197 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTN3O95197 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTN3O95197 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 AC092474.2-201ENST00000424288 719 ntBASIC17.62■□□□□ 0.41
RTN3O95197 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN3O95197 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN3O95197 RARRES2P8-201ENST00000566335 367 ntBASIC17.62■□□□□ 0.41
RTN3O95197 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN3O95197 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN3O95197 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN3O95197 AC026120.1-201ENST00000611536 926 ntBASIC17.62■□□□□ 0.41
RTN3O95197 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 AKAP8P1-201ENST00000434743 1349 ntBASIC17.62■□□□□ 0.41
RTN3O95197 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN3O95197 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN3O95197 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN3O95197 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN3O95197 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN3O95197 RN7SL589P-201ENST00000481268 310 ntBASIC17.61■□□□□ 0.41
RTN3O95197 AP002490.2-201ENST00000524791 560 ntBASIC17.61■□□□□ 0.41
RTN3O95197 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
RTN3O95197 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN3O95197 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN3O95197 AC004835.2-201ENST00000603762 682 ntBASIC17.61■□□□□ 0.41
RTN3O95197 AC013467.2-201ENST00000605472 835 ntBASIC17.61■□□□□ 0.41
RTN3O95197 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.61■□□□□ 0.41
RTN3O95197 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
RTN3O95197 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTN3O95197 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RTN3O95197 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN3O95197 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN3O95197 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN3O95197 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN3O95197 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 AC092068.3-201ENST00000587894 2016 ntBASIC17.6■□□□□ 0.41
RTN3O95197 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN3O95197 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms