Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.54□□□□□ -0.08
CCNKO75909 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCNKO75909 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CCNKO75909 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CCNKO75909 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCNKO75909 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCNKO75909 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 AL023284.2-201ENST00000405850 579 ntBASIC14.53□□□□□ -0.08
CCNKO75909 AC239809.2-201ENST00000415381 517 ntBASIC14.53□□□□□ -0.08
CCNKO75909 AC026396.1-201ENST00000419388 421 ntBASIC14.53□□□□□ -0.08
CCNKO75909 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 AP002490.2-201ENST00000524791 560 ntBASIC14.53□□□□□ -0.08
CCNKO75909 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.53□□□□□ -0.08
CCNKO75909 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.53□□□□□ -0.08
CCNKO75909 AC011298.2-201ENST00000617989 482 ntBASIC14.53□□□□□ -0.08
CCNKO75909 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.53□□□□□ -0.08
CCNKO75909 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCNKO75909 AC117489.1-201ENST00000625169 3217 ntBASIC14.53□□□□□ -0.08
CCNKO75909 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.53□□□□□ -0.08
CCNKO75909 LINC01101-201ENST00000622953 1884 ntBASIC14.52□□□□□ -0.08
CCNKO75909 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.52□□□□□ -0.08
CCNKO75909 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CCNKO75909 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CCNKO75909 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.52□□□□□ -0.08
CCNKO75909 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.52□□□□□ -0.08
CCNKO75909 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.52□□□□□ -0.08
CCNKO75909 SSR4P1-203ENST00000599569 2260 ntBASIC14.52□□□□□ -0.08
CCNKO75909 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCNKO75909 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCNKO75909 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms