Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PAX4O43316 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.02□□□□□ -0.49
PAX4O43316 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PAX4O43316 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PAX4O43316 NKILA-202ENST00000614771 2598 ntBASIC12.02□□□□□ -0.49
PAX4O43316 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PAX4O43316 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PAX4O43316 AC011676.5-201ENST00000624864 2660 ntBASIC12.02□□□□□ -0.49
PAX4O43316 AC008894.3-201ENST00000624324 3103 ntBASIC12.02□□□□□ -0.49
PAX4O43316 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PAX4O43316 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 SBF1P1-201ENST00000444527 5631 ntBASIC12.01□□□□□ -0.49
PAX4O43316 PI4KAP1-204ENST00000612579 1703 ntBASIC12.01□□□□□ -0.49
PAX4O43316 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.01□□□□□ -0.49
PAX4O43316 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.01□□□□□ -0.49
PAX4O43316 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 AC136632.2-201ENST00000512891 861 ntBASIC12.01□□□□□ -0.49
PAX4O43316 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 AP002469.2-201ENST00000531724 424 ntBASIC12.01□□□□□ -0.49
PAX4O43316 AL662844.1-201ENST00000546340 181 ntBASIC12.01□□□□□ -0.49
PAX4O43316 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.01□□□□□ -0.49
PAX4O43316 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.01□□□□□ -0.49
PAX4O43316 AC005593.1-201ENST00000624894 515 ntBASIC12.01□□□□□ -0.49
PAX4O43316 PGM5P2-202ENST00000637225 1043 ntBASIC12.01□□□□□ -0.49
PAX4O43316 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PAX4O43316 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PAX4O43316 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 AC243591.1-201ENST00000452967 1364 ntBASIC12.01□□□□□ -0.49
PAX4O43316 AC092053.1-201ENST00000605787 1936 ntBASIC12.01□□□□□ -0.49
PAX4O43316 AL021920.2-201ENST00000624828 1351 ntBASIC12.01□□□□□ -0.49
PAX4O43316 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
PAX4O43316 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PAX4O43316 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PAX4O43316 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.01□□□□□ -0.49
PAX4O43316 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12□□□□□ -0.49
PAX4O43316 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
PAX4O43316 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12□□□□□ -0.49
PAX4O43316 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC12□□□□□ -0.49
PAX4O43316 AP002414.1-201ENST00000391405 1147 ntBASIC12□□□□□ -0.49
PAX4O43316 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 ELK2BP-201ENST00000415014 1224 ntBASIC12□□□□□ -0.49
PAX4O43316 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 AC018712.1-201ENST00000455767 687 ntBASIC12□□□□□ -0.49
PAX4O43316 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12□□□□□ -0.49
PAX4O43316 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
PAX4O43316 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12□□□□□ -0.49
PAX4O43316 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12□□□□□ -0.49
PAX4O43316 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC12□□□□□ -0.49
PAX4O43316 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12□□□□□ -0.49
PAX4O43316 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
PAX4O43316 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms