Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ATP2A1O14983 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATP2A1O14983 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A1O14983 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A1O14983 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A1O14983 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A1O14983 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2A1O14983 AC002472.2-201ENST00000442739 958 ntBASIC19.06■□□□□ 0.64
ATP2A1O14983 TSPY16P-201ENST00000449843 468 ntBASIC19.06■□□□□ 0.64
ATP2A1O14983 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2A1O14983 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A1O14983 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2A1O14983 RN7SL204P-201ENST00000582831 262 ntBASIC19.06■□□□□ 0.64
ATP2A1O14983 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.06■□□□□ 0.64
ATP2A1O14983 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.06■□□□□ 0.64
ATP2A1O14983 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A1O14983 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A1O14983 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATP2A1O14983 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 AL671710.1-201ENST00000610245 2349 ntBASIC19.06■□□□□ 0.64
ATP2A1O14983 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2A1O14983 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2A1O14983 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATP2A1O14983 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 FAM220BP-201ENST00000377689 816 ntBASIC19.05■□□□□ 0.64
ATP2A1O14983 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 HLA-H-201ENST00000383620 1096 ntBASIC19.05■□□□□ 0.64
ATP2A1O14983 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP2A1O14983 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
ATP2A1O14983 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP2A1O14983 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP2A1O14983 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP2A1O14983 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2A1O14983 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 AC073439.1-201ENST00000624121 1774 ntBASIC19.05■□□□□ 0.64
ATP2A1O14983 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2A1O14983 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2A1O14983 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2A1O14983 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP2A1O14983 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A1O14983 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A1O14983 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A1O14983 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.04■□□□□ 0.64
ATP2A1O14983 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP2A1O14983 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A1O14983 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A1O14983 AC004890.2-204ENST00000481968 304 ntBASIC19.04■□□□□ 0.64
ATP2A1O14983 IGHV3-42-201ENST00000520410 361 ntBASIC19.04■□□□□ 0.64
ATP2A1O14983 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.04■□□□□ 0.64
ATP2A1O14983 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A1O14983 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
ATP2A1O14983 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP2A1O14983 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP2A1O14983 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP2A1O14983 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
ATP2A1O14983 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ATP2A1O14983 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A1O14983 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms