Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 AC104457.1-201ENST00000401024 814 ntBASIC20.71■□□□□ 0.91
RGPD3A6NKT7 RPL13P2-201ENST00000440687 659 ntBASIC20.71■□□□□ 0.91
RGPD3A6NKT7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 AP001258.2-201ENST00000529891 490 ntBASIC20.71■□□□□ 0.91
RGPD3A6NKT7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 MIR4706-201ENST00000582134 82 ntBASIC20.71■□□□□ 0.91
RGPD3A6NKT7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.71■□□□□ 0.91
RGPD3A6NKT7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 Z93015.1-201ENST00000451718 390 ntBASIC20.7■□□□□ 0.9
RGPD3A6NKT7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 AC005252.2-201ENST00000624630 1141 ntBASIC20.7■□□□□ 0.9
RGPD3A6NKT7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RGPD3A6NKT7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AC004898.1-201ENST00000451057 766 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 SPCS2P2-201ENST00000603270 608 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 BX323043.1-201ENST00000641006 1765 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 MSTO2P-201ENST00000314835 1709 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AL136982.4-201ENST00000437689 1740 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 EIF4HP1-201ENST00000453115 687 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 RPL13AP25-201ENST00000484130 612 ntBASIC20.69■□□□□ 0.9
RGPD3A6NKT7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RGPD3A6NKT7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 AC128714.1-201ENST00000637035 887 ntBASIC20.68■□□□□ 0.9
RGPD3A6NKT7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms