Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA3Q9Y5H0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 AC046185.3-201ENST00000623228 1824 ntBASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA3Q9Y5H0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 AC112191.1-201ENST00000523689 701 ntBASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 AC129492.6-201ENST00000611383 1305 ntBASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 ACTL9-202ENST00000612068 1252 ntBASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA3Q9Y5H0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 AL135999.2-201ENST00000622438 1686 ntBASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms