Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP2Q96SN8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 AC104794.3-201ENST00000566840 1248 ntBASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 AL589702.1-201ENST00000641229 1509 ntBASIC19.42■□□□□ 0.7
CDK5RAP2Q96SN8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 BASP1P1-201ENST00000430708 665 ntBASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 MIR4321-201ENST00000592276 80 ntBASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 EEF1DP4-201ENST00000446006 880 ntBASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP2Q96SN8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 AC098859.1-201ENST00000502915 1238 ntBASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms