Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.92■□□□□ 0.46
ALPK3Q96L96 AL049840.4-201ENST00000602422 811 ntBASIC17.92■□□□□ 0.46
ALPK3Q96L96 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALPK3Q96L96 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALPK3Q96L96 KRT8P22-201ENST00000562317 1415 ntBASIC17.91■□□□□ 0.46
ALPK3Q96L96 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MIR6069-201ENST00000620069 79 ntBASIC17.91■□□□□ 0.46
ALPK3Q96L96 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.91■□□□□ 0.46
ALPK3Q96L96 AL671710.1-201ENST00000610245 2349 ntBASIC17.91■□□□□ 0.46
ALPK3Q96L96 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALPK3Q96L96 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 KRT8P13-201ENST00000463294 1010 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 AC016629.1-201ENST00000596579 586 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 AC015967.2-201ENST00000624092 234 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 AC006435.4-201ENST00000625037 234 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 AL356737.1-201ENST00000634391 234 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 HINT2P1-201ENST00000419438 481 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 AC104596.2-201ENST00000512793 793 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 FAM86HP-204ENST00000513466 959 ntBASIC17.9■□□□□ 0.46
ALPK3Q96L96 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.9■□□□□ 0.46
ALPK3Q96L96 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALPK3Q96L96 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.89■□□□□ 0.46
ALPK3Q96L96 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ALPK3Q96L96 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ALPK3Q96L96 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ALPK3Q96L96 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ALPK3Q96L96 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ALPK3Q96L96 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.89■□□□□ 0.45
ALPK3Q96L96 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALPK3Q96L96 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 BCRP2-202ENST00000447763 634 ntBASIC17.89■□□□□ 0.45
ALPK3Q96L96 BCRP6-201ENST00000510112 632 ntBASIC17.89■□□□□ 0.45
ALPK3Q96L96 BCRP7-201ENST00000511549 544 ntBASIC17.89■□□□□ 0.45
ALPK3Q96L96 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 AC124283.3-201ENST00000570869 594 ntBASIC17.89■□□□□ 0.45
ALPK3Q96L96 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALPK3Q96L96 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ALPK3Q96L96 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALPK3Q96L96 AL138781.2-201ENST00000617896 1843 ntBASIC17.88■□□□□ 0.45
ALPK3Q96L96 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms