Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 PDPK2P-202ENST00000562415 1191 ntBASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 AC040169.1-201ENST00000565382 521 ntBASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 AL671883.3-201ENST00000603274 991 ntBASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC148Q8NFR7 AC006538.1-201ENST00000567905 1585 ntBASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 KRT8P39-201ENST00000396270 1433 ntBASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 SNX33P1-201ENST00000592116 1762 ntBASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 MIR3909-201ENST00000579518 119 ntBASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC148Q8NFR7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
CCDC148Q8NFR7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC148Q8NFR7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC148Q8NFR7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC148Q8NFR7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC148Q8NFR7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 RNU1-129P-201ENST00000384064 167 ntBASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 PGAM5P1-201ENST00000518923 814 ntBASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 U1.21-201ENST00000580816 167 ntBASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 AL031055.1-201ENST00000606362 631 ntBASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC148Q8NFR7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms