Protein–RNA interactions for Protein: Q8NCT1

ARRDC4, Arrestin domain-containing protein 4, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4Q8NCT1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARRDC4Q8NCT1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARRDC4Q8NCT1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC093525.9-201ENST00000624961 1746 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 RN7SL618P-201ENST00000477850 296 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 RNA5SP410-201ENST00000516285 106 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 KRT17P8-201ENST00000540749 863 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC008494.3-201ENST00000606615 944 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC073439.1-201ENST00000624121 1774 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 AC068880.1-201ENST00000507289 2297 ntBASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARRDC4Q8NCT1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AC079776.1-201ENST00000401540 1152 ntBASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AL080243.2-201ENST00000418783 582 ntBASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CHCHD2P3-201ENST00000603038 451 ntBASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ARRDC4Q8NCT1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARRDC4Q8NCT1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ARRDC4Q8NCT1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARRDC4Q8NCT1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
ARRDC4Q8NCT1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.47■□□□□ 0.55
ARRDC4Q8NCT1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms