Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 KLF2P3-201ENST00000451977 1087 ntBASIC18.62■□□□□ 0.57
TRIM50Q86XT4 AC093214.1-201ENST00000511688 1107 ntBASIC18.62■□□□□ 0.57
TRIM50Q86XT4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 MIR6080-201ENST00000617359 66 ntBASIC18.62■□□□□ 0.57
TRIM50Q86XT4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM50Q86XT4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 TUBB8P12-201ENST00000308911 1335 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 TUBB7P-202ENST00000428444 1305 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 TUBB8P7-204ENST00000567960 1332 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 MIR346-201ENST00000362234 95 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 MIR943-201ENST00000401286 94 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 ALG1L8P-201ENST00000533887 760 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 AC021097.1-201ENST00000607902 574 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 AC005332.8-201ENST00000622750 2735 ntBASIC18.61■□□□□ 0.57
TRIM50Q86XT4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM50Q86XT4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 AC107890.1-201ENST00000422478 521 ntBASIC18.6■□□□□ 0.57
TRIM50Q86XT4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM50Q86XT4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 AC060834.1-201ENST00000443027 2032 ntBASIC18.59■□□□□ 0.57
TRIM50Q86XT4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 AC142381.1-201ENST00000426099 345 ntBASIC18.59■□□□□ 0.57
TRIM50Q86XT4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.59■□□□□ 0.57
TRIM50Q86XT4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms