Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AL390961.4-201ENST00000623958 2535 ntBASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AL136982.4-201ENST00000437689 1740 ntBASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 CSF2RBP1-201ENST00000447905 391 ntBASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AC025048.3-201ENST00000590609 569 ntBASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 AC005702.4-201ENST00000618393 416 ntBASIC11.05□□□□□ -0.64
VPS13DQ5THJ4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 BCRP2-202ENST00000447763 634 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 BCRP6-201ENST00000510112 632 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 BCRP7-201ENST00000511549 544 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AL603756.1-201ENST00000606511 2163 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AL033527.5-201ENST00000641382 801 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AL139011.1-202ENST00000642063 584 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AC134043.2-201ENST00000624206 2238 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 TARDBPP1-201ENST00000442013 1203 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 WFDC1-204ENST00000613603 549 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 NEFHP1-201ENST00000412845 2629 ntBASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13DQ5THJ4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 AC067852.2-201ENST00000590513 2313 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 RPL7P3-201ENST00000441388 714 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 RNA5SP410-201ENST00000516285 106 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 AC074044.1-201ENST00000609673 707 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 BCYRN1-201ENST00000418539 200 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms