Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 TDH-203ENST00000531764 1110 ntBASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 AL021578.1-201ENST00000613646 709 ntBASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNAPC4Q5SXM2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
SNAPC4Q5SXM2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
SNAPC4Q5SXM2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
SNAPC4Q5SXM2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 ACTG1P3-201ENST00000431775 1114 ntBASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 PFN1P12-201ENST00000455938 534 ntBASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 AC068587.3-201ENST00000526613 355 ntBASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC26.82■■□□□ 1.88
SNAPC4Q5SXM2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 AC006033.1-201ENST00000440505 426 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 HNRNPA1P13-201ENST00000510646 963 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 AC006277.1-201ENST00000624348 1610 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 AC006538.1-201ENST00000567905 1585 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 NME4-207ENST00000450036 985 ntTSL 3 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 IGHJ2P-201ENST00000454480 60 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 AC036164.1-201ENST00000570544 333 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 LINC01115-203ENST00000606068 577 ntBASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC26.81■■□□□ 1.88
SNAPC4Q5SXM2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 KRT8P22-201ENST00000562317 1415 ntBASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 BCRP2-202ENST00000447763 634 ntBASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 BCRP6-201ENST00000510112 632 ntBASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 BCRP7-201ENST00000511549 544 ntBASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNAPC4Q5SXM2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 AC016396.2-201ENST00000562575 1417 ntBASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 RPL13AP20-201ENST00000459725 609 ntBASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNAPC4Q5SXM2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms