Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.6■□□□□ 0.41
USP46P62068 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 SPDYE9P-201ENST00000570642 692 ntBASIC17.6■□□□□ 0.41
USP46P62068 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 SPDYE10P-202ENST00000612005 668 ntBASIC17.6■□□□□ 0.41
USP46P62068 SPDYE8P-202ENST00000612377 668 ntBASIC17.6■□□□□ 0.41
USP46P62068 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.6■□□□□ 0.41
USP46P62068 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.6■□□□□ 0.41
USP46P62068 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
USP46P62068 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.6■□□□□ 0.41
USP46P62068 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP46P62068 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP46P62068 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
USP46P62068 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
USP46P62068 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.59■□□□□ 0.41
USP46P62068 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
USP46P62068 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
USP46P62068 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
USP46P62068 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.59■□□□□ 0.41
USP46P62068 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
USP46P62068 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.59■□□□□ 0.41
USP46P62068 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 AL671710.1-201ENST00000610245 2349 ntBASIC17.59■□□□□ 0.41
USP46P62068 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP46P62068 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP46P62068 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP46P62068 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
USP46P62068 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
USP46P62068 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.58■□□□□ 0.41
USP46P62068 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.58■□□□□ 0.41
USP46P62068 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.58■□□□□ 0.4
USP46P62068 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 TUBB8P12-201ENST00000308911 1335 ntBASIC17.58■□□□□ 0.4
USP46P62068 TUBB7P-202ENST00000428444 1305 ntBASIC17.58■□□□□ 0.4
USP46P62068 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 TUBB8P7-204ENST00000567960 1332 ntBASIC17.58■□□□□ 0.4
USP46P62068 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
USP46P62068 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.58■□□□□ 0.4
USP46P62068 TSEN15P1-201ENST00000423257 515 ntBASIC17.58■□□□□ 0.4
USP46P62068 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.58■□□□□ 0.4
USP46P62068 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.58■□□□□ 0.4
USP46P62068 FAM86C2P-203ENST00000528684 1004 ntBASIC17.58■□□□□ 0.4
USP46P62068 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
USP46P62068 AL161645.1-201ENST00000622716 1255 ntBASIC17.58■□□□□ 0.4
USP46P62068 AP001350.2-201ENST00000625104 1094 ntBASIC17.58■□□□□ 0.4
USP46P62068 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
USP46P62068 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
USP46P62068 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP46P62068 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms