Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 VENTXP5-201ENST00000523979 775 ntBASIC15.37■□□□□ 0.05
CDC42P60953 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.37■□□□□ 0.05
CDC42P60953 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.37■□□□□ 0.05
CDC42P60953 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.37■□□□□ 0.05
CDC42P60953 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC42P60953 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.36■□□□□ 0.05
CDC42P60953 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
CDC42P60953 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
CDC42P60953 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 YBX1P2-201ENST00000489612 999 ntBASIC15.36■□□□□ 0.05
CDC42P60953 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 DUX4L17-201ENST00000557360 1267 ntBASIC15.36■□□□□ 0.05
CDC42P60953 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC42P60953 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.36■□□□□ 0.05
CDC42P60953 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.36■□□□□ 0.05
CDC42P60953 AC005336.2-201ENST00000593183 939 ntBASIC15.36■□□□□ 0.05
CDC42P60953 AL353801.3-201ENST00000609898 542 ntBASIC15.36■□□□□ 0.05
CDC42P60953 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC42P60953 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 AC002310.6-201ENST00000624451 1377 ntBASIC15.36■□□□□ 0.05
CDC42P60953 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC42P60953 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CDC42P60953 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDC42P60953 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CDC42P60953 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.35■□□□□ 0.05
CDC42P60953 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 ACTG1P4-201ENST00000425123 1122 ntBASIC15.35■□□□□ 0.05
CDC42P60953 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC42P60953 BX664615.1-201ENST00000443558 458 ntBASIC15.35■□□□□ 0.05
CDC42P60953 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC42P60953 HOMER2P1-201ENST00000455653 964 ntBASIC15.35■□□□□ 0.05
CDC42P60953 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.35■□□□□ 0.05
CDC42P60953 AC011840.4-201ENST00000578471 627 ntBASIC15.35■□□□□ 0.05
CDC42P60953 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.35■□□□□ 0.05
CDC42P60953 AC139887.4-201ENST00000607877 719 ntBASIC15.35■□□□□ 0.05
CDC42P60953 AC124864.1-201ENST00000623408 392 ntBASIC15.35■□□□□ 0.05
CDC42P60953 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC42P60953 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDC42P60953 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms