Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
FOXG1P55316 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
FOXG1P55316 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
FOXG1P55316 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.64□□□□□ -0.07
FOXG1P55316 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.64□□□□□ -0.07
FOXG1P55316 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
FOXG1P55316 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.64□□□□□ -0.07
FOXG1P55316 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.64□□□□□ -0.07
FOXG1P55316 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
FOXG1P55316 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 PMS2P4-201ENST00000412466 1052 ntBASIC14.64□□□□□ -0.07
FOXG1P55316 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
FOXG1P55316 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.64□□□□□ -0.07
FOXG1P55316 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
FOXG1P55316 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
FOXG1P55316 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
FOXG1P55316 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
FOXG1P55316 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
FOXG1P55316 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FOXG1P55316 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.63□□□□□ -0.07
FOXG1P55316 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.63□□□□□ -0.07
FOXG1P55316 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
FOXG1P55316 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
FOXG1P55316 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 TFAMP1-201ENST00000412727 736 ntBASIC14.63□□□□□ -0.07
FOXG1P55316 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.63□□□□□ -0.07
FOXG1P55316 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.63□□□□□ -0.07
FOXG1P55316 ACTG1P14-201ENST00000446382 1122 ntBASIC14.63□□□□□ -0.07
FOXG1P55316 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 TIMM8BP1-201ENST00000452384 211 ntBASIC14.63□□□□□ -0.07
FOXG1P55316 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
FOXG1P55316 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 AC243562.1-201ENST00000560672 389 ntBASIC14.63□□□□□ -0.07
FOXG1P55316 AL135744.1-201ENST00000565098 629 ntBASIC14.63□□□□□ -0.07
FOXG1P55316 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.63□□□□□ -0.07
FOXG1P55316 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 AC105339.1-204ENST00000636249 355 ntBASIC14.63□□□□□ -0.07
FOXG1P55316 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.63□□□□□ -0.07
FOXG1P55316 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
FOXG1P55316 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FOXG1P55316 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 AL031731.1-201ENST00000642131 2094 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.62□□□□□ -0.07
FOXG1P55316 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
FOXG1P55316 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.62□□□□□ -0.07
FOXG1P55316 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FOXG1P55316 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms