Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC009947.1-201ENST00000444350 727 ntBASIC16.9■□□□□ 0.3
LIMK2P53671 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LIMK2P53671 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.9■□□□□ 0.3
LIMK2P53671 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.9■□□□□ 0.3
LIMK2P53671 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC005593.1-201ENST00000624894 515 ntBASIC16.9■□□□□ 0.3
LIMK2P53671 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 AL513523.2-202ENST00000427283 2040 ntBASIC16.89■□□□□ 0.29
LIMK2P53671 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LIMK2P53671 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.89■□□□□ 0.29
LIMK2P53671 AC136632.2-201ENST00000512891 861 ntBASIC16.89■□□□□ 0.29
LIMK2P53671 RNA5SP416-201ENST00000516838 111 ntBASIC16.89■□□□□ 0.29
LIMK2P53671 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.89■□□□□ 0.29
LIMK2P53671 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.89■□□□□ 0.29
LIMK2P53671 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.89■□□□□ 0.29
LIMK2P53671 AC013467.2-201ENST00000605472 835 ntBASIC16.89■□□□□ 0.29
LIMK2P53671 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LIMK2P53671 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.89■□□□□ 0.29
LIMK2P53671 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LIMK2P53671 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK2P53671 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK2P53671 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LIMK2P53671 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK2P53671 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK2P53671 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.88■□□□□ 0.29
LIMK2P53671 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK2P53671 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 AC040169.1-201ENST00000565382 521 ntBASIC16.88■□□□□ 0.29
LIMK2P53671 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 AL139011.1-202ENST00000642063 584 ntBASIC16.88■□□□□ 0.29
LIMK2P53671 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK2P53671 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 AC006277.1-201ENST00000624348 1610 ntBASIC16.88■□□□□ 0.29
LIMK2P53671 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.88■□□□□ 0.29
LIMK2P53671 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK2P53671 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK2P53671 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms