Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KDM5CP41229 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC24.66■■□□□ 1.54
KDM5CP41229 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC24.66■■□□□ 1.54
KDM5CP41229 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
KDM5CP41229 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC24.66■■□□□ 1.54
KDM5CP41229 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KDM5CP41229 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KDM5CP41229 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
KDM5CP41229 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC24.65■■□□□ 1.54
KDM5CP41229 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
KDM5CP41229 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
KDM5CP41229 MIR1908-201ENST00000410394 80 ntBASIC24.65■■□□□ 1.54
KDM5CP41229 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC24.65■■□□□ 1.54
KDM5CP41229 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC24.65■■□□□ 1.54
KDM5CP41229 MIR4538-201ENST00000581377 78 ntBASIC24.65■■□□□ 1.54
KDM5CP41229 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
KDM5CP41229 MIR6787-201ENST00000616675 61 ntBASIC24.65■■□□□ 1.54
KDM5CP41229 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC24.65■■□□□ 1.54
KDM5CP41229 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
KDM5CP41229 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC24.64■■□□□ 1.54
KDM5CP41229 AC018665.1-201ENST00000622927 1362 ntBASIC24.64■■□□□ 1.54
KDM5CP41229 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC24.64■■□□□ 1.54
KDM5CP41229 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
KDM5CP41229 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC24.64■■□□□ 1.54
KDM5CP41229 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC24.64■■□□□ 1.54
KDM5CP41229 FAM8A2P-201ENST00000528813 1142 ntBASIC24.64■■□□□ 1.54
KDM5CP41229 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
KDM5CP41229 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
KDM5CP41229 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC24.64■■□□□ 1.54
KDM5CP41229 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC24.64■■□□□ 1.53
KDM5CP41229 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
KDM5CP41229 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
KDM5CP41229 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
KDM5CP41229 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC24.64■■□□□ 1.53
KDM5CP41229 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
KDM5CP41229 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
KDM5CP41229 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
KDM5CP41229 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
KDM5CP41229 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 AL355994.2-201ENST00000447882 704 ntBASIC24.63■■□□□ 1.53
KDM5CP41229 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC24.63■■□□□ 1.53
KDM5CP41229 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
KDM5CP41229 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC24.63■■□□□ 1.53
KDM5CP41229 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC24.63■■□□□ 1.53
KDM5CP41229 MIR5189-201ENST00000577370 114 ntBASIC24.63■■□□□ 1.53
KDM5CP41229 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
KDM5CP41229 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC24.63■■□□□ 1.53
KDM5CP41229 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
KDM5CP41229 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC24.63■■□□□ 1.53
KDM5CP41229 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
KDM5CP41229 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC24.63■■□□□ 1.53
KDM5CP41229 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 AC004945.1-201ENST00000416738 983 ntBASIC24.63■■□□□ 1.53
KDM5CP41229 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
KDM5CP41229 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC24.63■■□□□ 1.53
KDM5CP41229 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC24.63■■□□□ 1.53
KDM5CP41229 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KDM5CP41229 AC026979.3-201ENST00000607315 403 ntBASIC24.63■■□□□ 1.53
KDM5CP41229 RPS24-214ENST00000613865 538 ntTSL 5 BASIC24.63■■□□□ 1.53
KDM5CP41229 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC24.62■■□□□ 1.53
KDM5CP41229 KRT8P44-201ENST00000441609 1350 ntBASIC24.62■■□□□ 1.53
KDM5CP41229 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
KDM5CP41229 PKD1P6-201ENST00000343738 4769 ntBASIC24.62■■□□□ 1.53
KDM5CP41229 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
KDM5CP41229 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC24.62■■□□□ 1.53
KDM5CP41229 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KDM5CP41229 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC24.62■■□□□ 1.53
KDM5CP41229 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC24.62■■□□□ 1.53
KDM5CP41229 FADS2-205ENST00000517839 469 ntTSL 3 BASIC24.62■■□□□ 1.53
KDM5CP41229 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC24.62■■□□□ 1.53
KDM5CP41229 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC24.62■■□□□ 1.53
KDM5CP41229 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC24.62■■□□□ 1.53
KDM5CP41229 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC24.62■■□□□ 1.53
KDM5CP41229 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC24.62■■□□□ 1.53
KDM5CP41229 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
KDM5CP41229 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms