Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.1■□□□□ 0.81
COL11A2P13942 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.1■□□□□ 0.81
COL11A2P13942 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
COL11A2P13942 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL11A2P13942 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.1■□□□□ 0.81
COL11A2P13942 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 MIR1908-201ENST00000410394 80 ntBASIC20.1■□□□□ 0.81
COL11A2P13942 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 FAM8A2P-201ENST00000528813 1142 ntBASIC20.1■□□□□ 0.81
COL11A2P13942 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.1■□□□□ 0.81
COL11A2P13942 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.1■□□□□ 0.81
COL11A2P13942 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.1■□□□□ 0.81
COL11A2P13942 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 MIR6069-201ENST00000620069 79 ntBASIC20.1■□□□□ 0.81
COL11A2P13942 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.09■□□□□ 0.81
COL11A2P13942 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL11A2P13942 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.09■□□□□ 0.81
COL11A2P13942 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 MEP1AP4-201ENST00000423244 1087 ntBASIC20.09■□□□□ 0.81
COL11A2P13942 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.09■□□□□ 0.81
COL11A2P13942 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.09■□□□□ 0.81
COL11A2P13942 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.09■□□□□ 0.81
COL11A2P13942 AL139011.1-202ENST00000642063 584 ntBASIC20.09■□□□□ 0.81
COL11A2P13942 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 AL512652.2-201ENST00000625156 1716 ntBASIC20.09■□□□□ 0.81
COL11A2P13942 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL11A2P13942 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL11A2P13942 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.09■□□□□ 0.81
COL11A2P13942 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.09■□□□□ 0.81
COL11A2P13942 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.08■□□□□ 0.81
COL11A2P13942 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
COL11A2P13942 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.08■□□□□ 0.81
COL11A2P13942 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL11A2P13942 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.08■□□□□ 0.81
COL11A2P13942 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.08■□□□□ 0.81
COL11A2P13942 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.08■□□□□ 0.81
COL11A2P13942 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.08■□□□□ 0.81
COL11A2P13942 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
COL11A2P13942 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL11A2P13942 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL11A2P13942 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL11A2P13942 BOLA2P3-201ENST00000404566 256 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 EEF1DP4-201ENST00000446006 880 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 CTBP2P5-201ENST00000454986 1264 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.07■□□□□ 0.8
COL11A2P13942 AC233724.13-201ENST00000598383 410 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 KRT8P44-201ENST00000441609 1350 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.07■□□□□ 0.8
COL11A2P13942 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL11A2P13942 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 AZGP1P1-201ENST00000411909 902 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms