Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 PCDHB18P-201ENST00000524813 2368 ntBASIC18.75■□□□□ 0.59
HOXC6P09630 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.75■□□□□ 0.59
HOXC6P09630 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.75■□□□□ 0.59
HOXC6P09630 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 GPR53P-205ENST00000457298 1084 ntBASIC18.75■□□□□ 0.59
HOXC6P09630 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.75■□□□□ 0.59
HOXC6P09630 AC135586.1-201ENST00000539323 574 ntBASIC18.75■□□□□ 0.59
HOXC6P09630 AC124947.2-201ENST00000547118 1133 ntBASIC18.75■□□□□ 0.59
HOXC6P09630 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXC6P09630 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 AC005332.8-201ENST00000622750 2735 ntBASIC18.75■□□□□ 0.59
HOXC6P09630 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXC6P09630 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HOXC6P09630 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.74■□□□□ 0.59
HOXC6P09630 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXC6P09630 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXC6P09630 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXC6P09630 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HOXC6P09630 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HOXC6P09630 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXC6P09630 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXC6P09630 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
HOXC6P09630 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HOXC6P09630 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HOXC6P09630 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
HOXC6P09630 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HOXC6P09630 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 TUBB8P12-201ENST00000308911 1335 ntBASIC18.74■□□□□ 0.59
HOXC6P09630 TUBB7P-202ENST00000428444 1305 ntBASIC18.74■□□□□ 0.59
HOXC6P09630 TUBB8P7-204ENST00000567960 1332 ntBASIC18.74■□□□□ 0.59
HOXC6P09630 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC6P09630 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HOXC6P09630 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
HOXC6P09630 DGCR5-201ENST00000399539 862 ntBASIC18.73■□□□□ 0.59
HOXC6P09630 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
HOXC6P09630 AC087499.6-201ENST00000411576 835 ntBASIC18.73■□□□□ 0.59
HOXC6P09630 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
HOXC6P09630 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.73■□□□□ 0.59
HOXC6P09630 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 GIMAP3P-201ENST00000495150 836 ntBASIC18.73■□□□□ 0.59
HOXC6P09630 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HOXC6P09630 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.73■□□□□ 0.59
HOXC6P09630 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.73■□□□□ 0.59
HOXC6P09630 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms