Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRAP04437 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRAP04437 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TCRAP04437 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRAP04437 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 AP002414.1-201ENST00000391405 1147 ntBASIC12.79□□□□□ -0.36
TCRAP04437 TSPY5P-201ENST00000426936 936 ntBASIC12.79□□□□□ -0.36
TCRAP04437 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.79□□□□□ -0.36
TCRAP04437 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TCRAP04437 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.79□□□□□ -0.36
TCRAP04437 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.79□□□□□ -0.36
TCRAP04437 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 AC090616.6-201ENST00000582640 721 ntBASIC12.79□□□□□ -0.36
TCRAP04437 IGHV3-41-201ENST00000613121 348 ntBASIC12.79□□□□□ -0.36
TCRAP04437 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TCRAP04437 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 AC006277.1-201ENST00000624348 1610 ntBASIC12.79□□□□□ -0.36
TCRAP04437 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 GGT3P-204ENST00000453783 1664 ntBASIC12.79□□□□□ -0.36
TCRAP04437 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
TCRAP04437 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TCRAP04437 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRAP04437 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRAP04437 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 RNF152P1-201ENST00000397754 604 ntBASIC12.78□□□□□ -0.36
TCRAP04437 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.78□□□□□ -0.36
TCRAP04437 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 AC087499.1-201ENST00000418141 1075 ntBASIC12.78□□□□□ -0.36
TCRAP04437 TSPY22P-201ENST00000427496 604 ntBASIC12.78□□□□□ -0.36
TCRAP04437 AL137013.1-201ENST00000432946 1228 ntBASIC12.78□□□□□ -0.36
TCRAP04437 NUS1P1-201ENST00000446295 882 ntBASIC12.78□□□□□ -0.36
TCRAP04437 SIGLEC30P-201ENST00000455569 941 ntBASIC12.78□□□□□ -0.36
TCRAP04437 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.78□□□□□ -0.36
TCRAP04437 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.78□□□□□ -0.36
TCRAP04437 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 GGT4P-201ENST00000623672 1708 ntBASIC12.78□□□□□ -0.36
TCRAP04437 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 AC126177.1-201ENST00000547829 2218 ntBASIC12.78□□□□□ -0.36
TCRAP04437 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
TCRAP04437 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 AC067930.6-201ENST00000623257 4947 ntBASIC12.78□□□□□ -0.36
TCRAP04437 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRAP04437 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms