Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 PCDHB17P-201ENST00000539533 2393 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-CO1P00395 YBX1P5-201ENST00000509441 847 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 MPDU1-223ENST00000582151 728 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 AC092902.6-201ENST00000641783 218 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 AC012569.1-201ENST00000591191 1524 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
MT-CO1P00395 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-CO1P00395 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
MT-CO1P00395 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MT-CO1P00395 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-CO1P00395 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MT-CO1P00395 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MT-CO1P00395 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.15■□□□□ 0.34
MT-CO1P00395 RPS8P6-201ENST00000426177 609 ntBASIC17.15■□□□□ 0.34
MT-CO1P00395 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-CO1P00395 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
MT-CO1P00395 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.15■□□□□ 0.34
MT-CO1P00395 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
MT-CO1P00395 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-CO1P00395 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 AC008894.3-201ENST00000624324 3103 ntBASIC17.15■□□□□ 0.34
MT-CO1P00395 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.15■□□□□ 0.34
MT-CO1P00395 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-CO1P00395 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
MT-CO1P00395 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 AC131009.4-201ENST00000624048 1740 ntBASIC17.14■□□□□ 0.33
MT-CO1P00395 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 AC211486.1-202ENST00000416371 468 ntBASIC17.14■□□□□ 0.33
MT-CO1P00395 MKNK2P1-201ENST00000437526 628 ntBASIC17.14■□□□□ 0.33
MT-CO1P00395 AC211476.1-201ENST00000503899 468 ntBASIC17.14■□□□□ 0.33
MT-CO1P00395 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.14■□□□□ 0.33
MT-CO1P00395 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
MT-CO1P00395 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.14■□□□□ 0.33
MT-CO1P00395 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MT-CO1P00395 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-CO1P00395 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms