Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
CDH16O75309 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDH16O75309 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH16O75309 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH16O75309 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 AC083849.1-201ENST00000615227 514 ntBASIC16.97■□□□□ 0.31
CDH16O75309 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH16O75309 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDH16O75309 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH16O75309 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 AL356309.3-201ENST00000624132 1934 ntBASIC16.97■□□□□ 0.31
CDH16O75309 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 PMPCAP1-201ENST00000508114 1576 ntBASIC16.97■□□□□ 0.31
CDH16O75309 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH16O75309 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH16O75309 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
CDH16O75309 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 AC148477.5-201ENST00000625164 1645 ntBASIC16.96■□□□□ 0.31
CDH16O75309 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH16O75309 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH16O75309 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.96■□□□□ 0.31
CDH16O75309 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH16O75309 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH16O75309 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.96■□□□□ 0.31
CDH16O75309 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH16O75309 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH16O75309 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH16O75309 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH16O75309 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH16O75309 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH16O75309 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CDH16O75309 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH16O75309 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH16O75309 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDH16O75309 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH16O75309 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH16O75309 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH16O75309 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH16O75309 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH16O75309 AL020989.1-201ENST00000422979 469 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms